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Cluster: MGYG000002580_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002580_13 MGYG000002580_13_13 15844 17604 - 3.A.1.1.9
TC MGYG000002580_13 MGYG000002580_13_14 17672 18520 - 3.A.1.1.27
TC MGYG000002580_13 MGYG000002580_13_15 18517 19854 - 3.A.1.1.27
pfam MGYG000002580_13 MGYG000002580_13_16 19945 21213 - SBP_bac_1 | SBP_bac_8
TC MGYG000002580_13 MGYG000002580_13_17 21392 23185 - 9.B.33.1.1
TF MGYG000002580_13 MGYG000002580_13_18 23220 24764 - HTH_AraC
CAZyme MGYG000002580_13 MGYG000002580_13_19 24867 27212 - GT35
TF MGYG000002580_13 MGYG000002580_13_20 27402 28280 + HTH_AraC | HTH_AraC
TC MGYG000002580_13 MGYG000002580_13_21 28383 29312 - 2.A.19.5.2
Gene ID: MGYG000002580_13_13
Type: TC
Location: 15844 - 17604 (-)
Gene ID: MGYG000002580_13_14
Type: TC
Location: 17672 - 18520 (-)
Gene ID: MGYG000002580_13_15
Type: TC
Location: 18517 - 19854 (-)
Gene ID: MGYG000002580_13_16
Type: pfam
Location: 19945 - 21213 (-)
Gene ID: MGYG000002580_13_17
Type: TC
Location: 21392 - 23185 (-)
Gene ID: MGYG000002580_13_18
Type: TF
Location: 23220 - 24764 (-)
Gene ID: MGYG000002580_13_19
Type: CAZyme
Location: 24867 - 27212 (-)
Gene ID: MGYG000002580_13_20
Type: TF
Location: 27402 - 28280 (+)
Gene ID: MGYG000002580_13_21
Type: TC
Location: 28383 - 29312 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002580_13_21 vegan > omnivore 1.16994 0.03904

🧭 Explore Read Mapping of CGC

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