Cluster: MGYG000002580_CGC7
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000002580
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002580_2 | MGYG000002580_2_40 | 57228 | 57977 | + | 9.B.18.1.3 |
| CAZyme | MGYG000002580_2 | MGYG000002580_2_41 | 58007 | 59107 | + | GT2 |
| TC | MGYG000002580_2 | MGYG000002580_2_42 | 59110 | 60978 | + | 9.B.18.2.1 |
| CAZyme | MGYG000002580_2 | MGYG000002580_2_43 | 61024 | 62124 | + | GT4 |
| CAZyme | MGYG000002580_2 | MGYG000002580_2_44 | 62158 | 63255 | + | GT4 |
| pfam | MGYG000002580_2 | MGYG000002580_2_45 | 63272 | 64195 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | MGYG000002580_2 | MGYG000002580_2_46 | 64215 | 65408 | + | GT76 |
| NULL(UNKNOWN) | MGYG000002580_2 | MGYG000002580_2_47 | 65444 | 66370 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002580_2 | MGYG000002580_2_48 | 67049 | 67807 | + | GT2 |
| pfam | MGYG000002580_2 | MGYG000002580_2_49 | 68062 | 69174 | + | Amino_oxidase | GLF | NAD_binding_8 |
| TC | MGYG000002580_2 | MGYG000002580_2_50 | 69314 | 69790 | + | 9.A.24.1.7 |
| CAZyme | MGYG000002580_2 | MGYG000002580_2_51 | 69904 | 71478 | + | GH25 |
| NULL(UNKNOWN) | MGYG000002580_2 | MGYG000002580_2_52 | 71714 | 72841 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002580_2 | MGYG000002580_2_53 | 72877 | 74448 | + | 2.A.50.2.1 |
Gene ID: MGYG000002580_2_40
Type: TC
Location: 57228 - 57977 (+)
Type: TC
Location: 57228 - 57977 (+)
Gene ID: MGYG000002580_2_41
Type: CAZyme
Location: 58007 - 59107 (+)
Type: CAZyme
Location: 58007 - 59107 (+)
Gene ID: MGYG000002580_2_42
Type: TC
Location: 59110 - 60978 (+)
Type: TC
Location: 59110 - 60978 (+)
Gene ID: MGYG000002580_2_43
Type: CAZyme
Location: 61024 - 62124 (+)
Type: CAZyme
Location: 61024 - 62124 (+)
Gene ID: MGYG000002580_2_44
Type: CAZyme
Location: 62158 - 63255 (+)
Type: CAZyme
Location: 62158 - 63255 (+)
Gene ID: MGYG000002580_2_45
Type: pfam
Location: 63272 - 64195 (+)
Type: pfam
Location: 63272 - 64195 (+)
Gene ID: MGYG000002580_2_46
Type: CAZyme
Location: 64215 - 65408 (+)
Type: CAZyme
Location: 64215 - 65408 (+)
Gene ID: MGYG000002580_2_47
Type:
Location: 65444 - 66370 (+)
Type:
Location: 65444 - 66370 (+)
Gene ID: MGYG000002580_2_48
Type: CAZyme
Location: 67049 - 67807 (+)
Type: CAZyme
Location: 67049 - 67807 (+)
Gene ID: MGYG000002580_2_49
Type: pfam
Location: 68062 - 69174 (+)
Type: pfam
Location: 68062 - 69174 (+)
Gene ID: MGYG000002580_2_50
Type: TC
Location: 69314 - 69790 (+)
Type: TC
Location: 69314 - 69790 (+)
Gene ID: MGYG000002580_2_51
Type: CAZyme
Location: 69904 - 71478 (+)
Type: CAZyme
Location: 69904 - 71478 (+)
Gene ID: MGYG000002580_2_52
Type:
Location: 71714 - 72841 (+)
Type:
Location: 71714 - 72841 (+)
Gene ID: MGYG000002580_2_53
Type: TC
Location: 72877 - 74448 (+)
Type: TC
Location: 72877 - 74448 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp000436475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.