Genome Details
Selected Rep_genome_ID: HRGMv2_4650
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
HGM16780
Species
HGM16780 sp900762585
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4650 | 1,938,365 | 96.77% | 1.075% | Japan | Asia | HRGM |
| SW134_98 | 1,701,944 | 90.57% | 1.14% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4650_CGC4 | CGCFAM_00326 | Yes | 3 | 1 | |
| HRGMv2_4650_CGC1 | CGCFAM_00346 | Yes | 4 | 2 | |
| HRGMv2_4650_CGC2 | CGCFAM_02201 | Yes | 6 | 1 | |
| HRGMv2_4650_CGC8 | CGCFAM_02462 | Yes | 4 | 1 | |
| HRGMv2_4650_CGC6 | CGCFAM_07783 | Yes | 3 | 1 |
Top CAZyme Families