Cluster: HRGMv2_4650_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4650
- CGC Family ID: CGCFAM_00326
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4650_43 | HRGMv2_4650_43_6 | 10287 | 12629 | + | GT51 |
| pfam | HRGMv2_4650_43 | HRGMv2_4650_43_7 | 12706 | 13140 | + | NfeD |
| TC | HRGMv2_4650_43 | HRGMv2_4650_43_8 | 13142 | 14125 | + | 8.A.21.2.2 |
Gene ID: HRGMv2_4650_43_6
Type: CAZyme
Location: 10287 - 12629 (+)
Type: CAZyme
Location: 10287 - 12629 (+)
Gene ID: HRGMv2_4650_43_7
Type: pfam
Location: 12706 - 13140 (+)
Type: pfam
Location: 12706 - 13140 (+)
Gene ID: HRGMv2_4650_43_8
Type: TC
Location: 13142 - 14125 (+)
Type: TC
Location: 13142 - 14125 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
HGM16780
Species
HGM16780 sp900762585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.