Cluster: HRGMv2_4650_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4650
- CGC Family ID: CGCFAM_07783
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4650_53 | HRGMv2_4650_53_3 | 1978 | 3747 | - | 3.A.1.106.2 |
| pfam | HRGMv2_4650_53 | HRGMv2_4650_53_4 | 3731 | 5011 | - | TOD1_MUCI70 |
| CAZyme | HRGMv2_4650_53 | HRGMv2_4650_53_5 | 5022 | 6170 | - | GT8 |
Gene ID: HRGMv2_4650_53_3
Type: TC
Location: 1978 - 3747 (-)
Type: TC
Location: 1978 - 3747 (-)
Gene ID: HRGMv2_4650_53_4
Type: pfam
Location: 3731 - 5011 (-)
Type: pfam
Location: 3731 - 5011 (-)
Gene ID: HRGMv2_4650_53_5
Type: CAZyme
Location: 5022 - 6170 (-)
Type: CAZyme
Location: 5022 - 6170 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
HGM16780
Species
HGM16780 sp900762585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.