Cluster: HRGMv2_4650_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4650
- CGC Family ID: CGCFAM_00346
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4650_4 | HRGMv2_4650_4_71 | 58786 | 59733 | + | GT2 |
| CAZyme | HRGMv2_4650_4 | HRGMv2_4650_4_72 | 59736 | 60656 | + | GT2 |
| STP | HRGMv2_4650_4 | HRGMv2_4650_4_73 | 60661 | 61863 | + | Aminotran_1_2 |
| TC | HRGMv2_4650_4 | HRGMv2_4650_4_74 | 61943 | 63388 | - | 2.A.38.1.3 |
Gene ID: HRGMv2_4650_4_71
Type: CAZyme
Location: 58786 - 59733 (+)
Type: CAZyme
Location: 58786 - 59733 (+)
Gene ID: HRGMv2_4650_4_72
Type: CAZyme
Location: 59736 - 60656 (+)
Type: CAZyme
Location: 59736 - 60656 (+)
Gene ID: HRGMv2_4650_4_73
Type: STP
Location: 60661 - 61863 (+)
Type: STP
Location: 60661 - 61863 (+)
Gene ID: HRGMv2_4650_4_74
Type: TC
Location: 61943 - 63388 (-)
Type: TC
Location: 61943 - 63388 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
HGM16780
Species
HGM16780 sp900762585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.