Cluster: HRGMv2_4650_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4650
- CGC Family ID: CGCFAM_02462
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4650_65 | HRGMv2_4650_65_2 | 212 | 1216 | - | GT2 |
| STP | HRGMv2_4650_65 | HRGMv2_4650_65_3 | 1555 | 2154 | - | HTH_7 |
| STP | HRGMv2_4650_65 | HRGMv2_4650_65_4 | 2760 | 3374 | + | Nitroreductase |
| TC | HRGMv2_4650_65 | HRGMv2_4650_65_5 | 3843 | 4832 | - | 2.A.1.3.45 |
Gene ID: HRGMv2_4650_65_2
Type: CAZyme
Location: 212 - 1216 (-)
Type: CAZyme
Location: 212 - 1216 (-)
Gene ID: HRGMv2_4650_65_3
Type: STP
Location: 1555 - 2154 (-)
Type: STP
Location: 1555 - 2154 (-)
Gene ID: HRGMv2_4650_65_4
Type: STP
Location: 2760 - 3374 (+)
Type: STP
Location: 2760 - 3374 (+)
Gene ID: HRGMv2_4650_65_5
Type: TC
Location: 3843 - 4832 (-)
Type: TC
Location: 3843 - 4832 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
HGM16780
Species
HGM16780 sp900762585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.