Genome Details
Selected Rep_genome_ID: HRGMv2_4568
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp934476685
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4568 | 2,532,346 | 98.51% | 0% | Malaysia | Asia | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-I-L_E_21_2379.46 | 2,600,774 | 92.47% | 0% | NA | Africa | Hadza |
| Rep_3489 | 2,648,481 | 96.5753% | 0.684932% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4568_CGC9 | CGCFAM_00094 | Yes | 6 | 1 | beta-mannan/fructan |
| HRGMv2_4568_CGC24 | CGCFAM_00683 | Yes | 3 | 1 | |
| HRGMv2_4568_CGC3 | CGCFAM_00753 | Yes | 3 | 1 | |
| HRGMv2_4568_CGC1 | CGCFAM_00813 | Yes | 4 | 1 | |
| HRGMv2_4568_CGC15 | CGCFAM_03269 | Yes | 5 | 1 | |
| HRGMv2_4568_CGC7 | CGCFAM_04665 | Yes | 3 | 2 | |
| HRGMv2_4568_CGC14 | CGCFAM_06169 | Yes | 7 | 1 | |
| HRGMv2_4568_CGC13 | CGCFAM_07174 | Yes | 3 | 1 | |
| HRGMv2_4568_CGC11 | CGCFAM_10652 | Yes | 4 | 1 |
Top CAZyme Families