Cluster: HRGMv2_4568_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4568
- CGC Family ID: CGCFAM_10652
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4568_16 | HRGMv2_4568_16_13 | 16695 | 17234 | - | 3.A.1.26.5 |
| pfam | HRGMv2_4568_16 | HRGMv2_4568_16_14 | 18336 | 19649 | - | ThiC_Rad_SAM |
| STP | HRGMv2_4568_16 | HRGMv2_4568_16_15 | 19668 | 20480 | - | PfkB |
| CAZyme | HRGMv2_4568_16 | HRGMv2_4568_16_16 | 20785 | 23193 | - | GT35 |
Gene ID: HRGMv2_4568_16_13
Type: TC
Location: 16695 - 17234 (-)
Type: TC
Location: 16695 - 17234 (-)
Gene ID: HRGMv2_4568_16_14
Type: pfam
Location: 18336 - 19649 (-)
Type: pfam
Location: 18336 - 19649 (-)
Gene ID: HRGMv2_4568_16_15
Type: STP
Location: 19668 - 20480 (-)
Type: STP
Location: 19668 - 20480 (-)
Gene ID: HRGMv2_4568_16_16
Type: CAZyme
Location: 20785 - 23193 (-)
Type: CAZyme
Location: 20785 - 23193 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp934476685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.