Cluster: HRGMv2_4568_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4568
- CGC Family ID: CGCFAM_00813
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4568_1 | HRGMv2_4568_1_19 | 21288 | 23696 | - | GH94 |
| NULL(UNKNOWN) | HRGMv2_4568_1 | HRGMv2_4568_1_20 | 24054 | 24641 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4568_1 | HRGMv2_4568_1_21 | 24711 | 26552 | - | 3.A.1.135.5 |
| TC | HRGMv2_4568_1 | HRGMv2_4568_1_22 | 26552 | 28279 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_4568_1_19
Type: CAZyme
Location: 21288 - 23696 (-)
Type: CAZyme
Location: 21288 - 23696 (-)
Gene ID: HRGMv2_4568_1_20
Type:
Location: 24054 - 24641 (+)
Type:
Location: 24054 - 24641 (+)
Gene ID: HRGMv2_4568_1_21
Type: TC
Location: 24711 - 26552 (-)
Type: TC
Location: 24711 - 26552 (-)
Gene ID: HRGMv2_4568_1_22
Type: TC
Location: 26552 - 28279 (-)
Type: TC
Location: 26552 - 28279 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp934476685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.