Cluster: HRGMv2_4568_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4568
- CGC Family ID: CGCFAM_03269
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4568_48 | HRGMv2_4568_48_9 | 9913 | 11295 | + | 3.B.1.1.5 |
| TC | HRGMv2_4568_48 | HRGMv2_4568_48_10 | 11325 | 11687 | + | 3.B.1.1.2 |
| TC | HRGMv2_4568_48 | HRGMv2_4568_48_11 | 11730 | 13127 | + | 3.B.1.1.6 |
| pfam | HRGMv2_4568_48 | HRGMv2_4568_48_12 | 13206 | 14333 | + | DUF4317 |
| CAZyme | HRGMv2_4568_48 | HRGMv2_4568_48_13 | 14405 | 16750 | - | GH31_3 |
Gene ID: HRGMv2_4568_48_9
Type: TC
Location: 9913 - 11295 (+)
Type: TC
Location: 9913 - 11295 (+)
Gene ID: HRGMv2_4568_48_10
Type: TC
Location: 11325 - 11687 (+)
Type: TC
Location: 11325 - 11687 (+)
Gene ID: HRGMv2_4568_48_11
Type: TC
Location: 11730 - 13127 (+)
Type: TC
Location: 11730 - 13127 (+)
Gene ID: HRGMv2_4568_48_12
Type: pfam
Location: 13206 - 14333 (+)
Type: pfam
Location: 13206 - 14333 (+)
Gene ID: HRGMv2_4568_48_13
Type: CAZyme
Location: 14405 - 16750 (-)
Type: CAZyme
Location: 14405 - 16750 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp934476685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.