Genome Details
Selected Rep_genome_ID: HRGMv2_4406
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Avoscillospira
Species
Avoscillospira stercoripullorum
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4406 | 2,361,579 | 98.99% | 1.677% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4406_CGC11 | CGCFAM_00010 | Yes | 4 | 2 | alpha-glucan |
| HRGMv2_4406_CGC10 | CGCFAM_00989 | Yes | 7 | 3 | |
| HRGMv2_4406_CGC12 | CGCFAM_01754 | Yes | 5 | 1 | |
| HRGMv2_4406_CGC13 | CGCFAM_05149 | Yes | 3 | 1 | |
| HRGMv2_4406_CGC17 | CGCFAM_05833 | Yes | 3 | 1 |
Top CAZyme Families