Cluster: HRGMv2_4406_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4406
- CGC Family ID: CGCFAM_05833
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4406_68 | HRGMv2_4406_68_3 | 989 | 2302 | - | GH3 |
| NULL(UNKNOWN) | HRGMv2_4406_68 | HRGMv2_4406_68_4 | 2348 | 3595 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4406_68 | HRGMv2_4406_68_5 | 3608 | 4477 | - | 2.A.115.1.1 |
Gene ID: HRGMv2_4406_68_3
Type: CAZyme
Location: 989 - 2302 (-)
Type: CAZyme
Location: 989 - 2302 (-)
Gene ID: HRGMv2_4406_68_4
Type:
Location: 2348 - 3595 (-)
Type:
Location: 2348 - 3595 (-)
Gene ID: HRGMv2_4406_68_5
Type: TC
Location: 3608 - 4477 (-)
Type: TC
Location: 3608 - 4477 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Avoscillospira
Species
Avoscillospira stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.