Cluster: HRGMv2_4406_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4406
- CGC Family ID: CGCFAM_05149
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4406_40 | HRGMv2_4406_40_5 | 4349 | 5920 | - | 3.A.1.147.6 |
| TC | HRGMv2_4406_40 | HRGMv2_4406_40_6 | 5922 | 6638 | - | 3.A.1.147.6 |
| CAZyme | HRGMv2_4406_40 | HRGMv2_4406_40_7 | 6766 | 7560 | + | CE4 |
Gene ID: HRGMv2_4406_40_5
Type: TC
Location: 4349 - 5920 (-)
Type: TC
Location: 4349 - 5920 (-)
Gene ID: HRGMv2_4406_40_6
Type: TC
Location: 5922 - 6638 (-)
Type: TC
Location: 5922 - 6638 (-)
Gene ID: HRGMv2_4406_40_7
Type: CAZyme
Location: 6766 - 7560 (+)
Type: CAZyme
Location: 6766 - 7560 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Avoscillospira
Species
Avoscillospira stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.