Genome Details
Selected Rep_genome_ID: HRGMv2_4201
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4201 | 2,145,875 | 95.95% | 1.246% | Malaysia | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4201_CGC5 | CGCFAM_00012 | Yes | 4 | 1 | host glycan/beta-glucan |
| HRGMv2_4201_CGC12 | CGCFAM_01247 | Yes | 7 | 3 | |
| HRGMv2_4201_CGC3 | CGCFAM_02890 | Yes | 5 | 2 | |
| HRGMv2_4201_CGC8 | CGCFAM_06073 | Yes | 5 | 1 | |
| HRGMv2_4201_CGC13 | CGCFAM_09887 | Yes | 5 | 2 |
Top CAZyme Families