Genome Details
Selected Rep_genome_ID: HRGMv2_3999
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3999 | 3,073,205 | 94.72% | 0.74% | Tanzania | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3999_CGC8 | CGCFAM_00001 | Yes | 9 | 3 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_3999_CGC27 | CGCFAM_00002 | Yes | 4 | 3 | |
| HRGMv2_3999_CGC6 | CGCFAM_00017 | Yes | 8 | 2 | fructan |
| HRGMv2_3999_CGC26 | CGCFAM_00044 | Yes | 5 | 2 | beta-mannan/xylan/beta-glucan |
| HRGMv2_3999_CGC24 | CGCFAM_00062 | Yes | 5 | 2 | beta-glucan |
| HRGMv2_3999_CGC30 | CGCFAM_00349 | Yes | 6 | 1 | |
| HRGMv2_3999_CGC25 | CGCFAM_00360 | Yes | 9 | 3 | host glycan |
| HRGMv2_3999_CGC21 | CGCFAM_00412 | Yes | 3 | 1 | |
| HRGMv2_3999_CGC17 | CGCFAM_00612 | Yes | 5 | 3 | |
| HRGMv2_3999_CGC10 | CGCFAM_00901 | Yes | 9 | 1 | |
| HRGMv2_3999_CGC34 | CGCFAM_01034 | Yes | 5 | 1 | |
| HRGMv2_3999_CGC15 | CGCFAM_02092 | Yes | 3 | 2 | |
| HRGMv2_3999_CGC28 | CGCFAM_03370 | Yes | 5 | 3 | |
| HRGMv2_3999_CGC5 | CGCFAM_04557 | Yes | 5 | 1 | |
| HRGMv2_3999_CGC2 | CGCFAM_07411 | Yes | 4 | 1 | |
| HRGMv2_3999_CGC33 | CGCFAM_09524 | Yes | 7 | 1 |
Top CAZyme Families