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Cluster: HRGMv2_3999_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3999_49 HRGMv2_3999_49_1 2 2836 - CE20
sulfatase HRGMv2_3999_49 HRGMv2_3999_49_2 2894 3565 - S1_16
CAZyme HRGMv2_3999_49 HRGMv2_3999_49_3 3574 5589 - GH20
CAZyme HRGMv2_3999_49 HRGMv2_3999_49_4 5694 7331 - CBM93 | GH33
TC HRGMv2_3999_49 HRGMv2_3999_49_5 7449 9014 - 8.A.46.1.4
TC HRGMv2_3999_49 HRGMv2_3999_49_6 9042 12371 - 1.B.14.6.1
pfam HRGMv2_3999_49 HRGMv2_3999_49_7 12431 13612 - GlcNAc_2-epim
pfam HRGMv2_3999_49 HRGMv2_3999_49_8 13762 14679 - DHDPS
TC HRGMv2_3999_49 HRGMv2_3999_49_9 14735 16015 - 2.A.1.14.14
Gene ID: HRGMv2_3999_49_1
Type: CAZyme
Location: 2 - 2836 (-)
Gene ID: HRGMv2_3999_49_2
Type: sulfatase
Location: 2894 - 3565 (-)
Gene ID: HRGMv2_3999_49_3
Type: CAZyme
Location: 3574 - 5589 (-)
Gene ID: HRGMv2_3999_49_4
Type: CAZyme
Location: 5694 - 7331 (-)
Gene ID: HRGMv2_3999_49_5
Type: TC
Location: 7449 - 9014 (-)
Gene ID: HRGMv2_3999_49_6
Type: TC
Location: 9042 - 12371 (-)
Gene ID: HRGMv2_3999_49_7
Type: pfam
Location: 12431 - 13612 (-)
Gene ID: HRGMv2_3999_49_8
Type: pfam
Location: 13762 - 14679 (-)
Gene ID: HRGMv2_3999_49_9
Type: TC
Location: 14735 - 16015 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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