Genome Details
Selected Rep_genome_ID: HRGMv2_3772
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia sp900545155
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3772 | 3,086,875 | 97.95% | 0.68% | Cameroon | Africa | HRGM |
| MGYG000002584 | 3,044,716 | 97.96% | 1.36% | China | Asia | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3772_CGC3 | CGCFAM_00013 | Yes | 5 | 1 | |
| HRGMv2_3772_CGC16 | CGCFAM_00492 | Yes | 3 | 1 | |
| HRGMv2_3772_CGC7 | CGCFAM_01981 | Yes | 9 | 4 | |
| HRGMv2_3772_CGC8 | CGCFAM_04335 | Yes | 7 | 1 | |
| HRGMv2_3772_CGC32 | CGCFAM_04743 | Yes | 5 | 3 | |
| HRGMv2_3772_CGC4 | CGCFAM_04766 | Yes | 7 | 1 | |
| HRGMv2_3772_CGC1 | CGCFAM_06239 | Yes | 3 | 1 | |
| HRGMv2_3772_CGC42 | CGCFAM_07961 | Yes | 4 | 1 | |
| HRGMv2_3772_CGC45 | CGCFAM_08934 | Yes | 5 | 1 | |
| HRGMv2_3772_CGC41 | CGCFAM_10431 | Yes | 7 | 2 |
Top CAZyme Families