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Cluster: HRGMv2_3772_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3772_2 HRGMv2_3772_2_43 72096 73589 + GH125
TC HRGMv2_3772_2 HRGMv2_3772_2_44 73618 74826 + 2.A.1.7.16
sulfatase HRGMv2_3772_2 HRGMv2_3772_2_45 74819 75940 + S1_7
pfam HRGMv2_3772_2 HRGMv2_3772_2_46 75947 77134 - Transglut_core
CAZyme HRGMv2_3772_2 HRGMv2_3772_2_47 77131 79794 - GH2
CAZyme HRGMv2_3772_2 HRGMv2_3772_2_48 79804 82038 - GH92
pfam HRGMv2_3772_2 HRGMv2_3772_2_49 82239 83414 + Metallophos
NULL(UNKNOWN) HRGMv2_3772_2 HRGMv2_3772_2_50 83545 84669 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3772_2 HRGMv2_3772_2_51 84809 87103 + GH105
Gene ID: HRGMv2_3772_2_43
Type: CAZyme
Location: 72096 - 73589 (+)
Gene ID: HRGMv2_3772_2_44
Type: TC
Location: 73618 - 74826 (+)
Gene ID: HRGMv2_3772_2_45
Type: sulfatase
Location: 74819 - 75940 (+)
Gene ID: HRGMv2_3772_2_46
Type: pfam
Location: 75947 - 77134 (-)
Gene ID: HRGMv2_3772_2_47
Type: CAZyme
Location: 77131 - 79794 (-)
Gene ID: HRGMv2_3772_2_48
Type: CAZyme
Location: 79804 - 82038 (-)
Gene ID: HRGMv2_3772_2_49
Type: pfam
Location: 82239 - 83414 (+)
Gene ID: HRGMv2_3772_2_50
Type:
Location: 83545 - 84669 (+)
Gene ID: HRGMv2_3772_2_51
Type: CAZyme
Location: 84809 - 87103 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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