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Cluster: HRGMv2_3772_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3772_36 HRGMv2_3772_36_3 1936 2637 + GT2
NULL(UNKNOWN) HRGMv2_3772_36 HRGMv2_3772_36_4 2644 4641 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3772_36 HRGMv2_3772_36_5 4666 6282 - HMGL-like | LeuA_dimer | HCS_D2
TC HRGMv2_3772_36 HRGMv2_3772_36_6 6431 8602 - 2.A.16.2.2
pfam HRGMv2_3772_36 HRGMv2_3772_36_7 9600 9893 + DUF2089
NULL(UNKNOWN) HRGMv2_3772_36 HRGMv2_3772_36_8 9897 10238 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3772_36 HRGMv2_3772_36_9 10295 11749 - GH109
Gene ID: HRGMv2_3772_36_3
Type: CAZyme
Location: 1936 - 2637 (+)
Gene ID: HRGMv2_3772_36_4
Type:
Location: 2644 - 4641 (+)
Gene ID: HRGMv2_3772_36_5
Type: pfam
Location: 4666 - 6282 (-)
Gene ID: HRGMv2_3772_36_6
Type: TC
Location: 6431 - 8602 (-)
Gene ID: HRGMv2_3772_36_7
Type: pfam
Location: 9600 - 9893 (+)
Gene ID: HRGMv2_3772_36_8
Type:
Location: 9897 - 10238 (+)
Gene ID: HRGMv2_3772_36_9
Type: CAZyme
Location: 10295 - 11749 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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