Genome Details
Selected Rep_genome_ID: HRGMv2_3122
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerotruncus
Species
Anaerotruncus massiliensis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR087846 | 3,047,293 | 96.64% | 0% | China | Asia | CGMR |
| HRGMv2_3122 | 3,091,800 | 99.32% | 0% | Japan | Asia | HRGM |
| MGYG000004618 | 2,827,605 | 97.88% | 0.27% | France | Europe | UHGG |
| Rep_3391 | 2,949,979 | 98.8255% | 0.671141% | NA | NA | WIS |
| SW127_111 | 2,890,448 | 97.29% | 0.67% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3122_CGC15 | CGCFAM_00010 | Yes | 10 | 2 | alpha-glucan |
| HRGMv2_3122_CGC9 | CGCFAM_00692 | Yes | 4 | 1 | |
| HRGMv2_3122_CGC14 | CGCFAM_01480 | Yes | 8 | 1 | beta-glucan |
| HRGMv2_3122_CGC5 | CGCFAM_06004 | Yes | 9 | 1 | |
| HRGMv2_3122_CGC17 | CGCFAM_06202 | Yes | 5 | 2 | |
| HRGMv2_3122_CGC10 | CGCFAM_08981 | Yes | 9 | 3 |
Top CAZyme Families