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Cluster: HRGMv2_3122_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3122_21 HRGMv2_3122_21_8 4434 5591 - 9.B.141.1.1
pfam HRGMv2_3122_21 HRGMv2_3122_21_9 5680 7257 - Alk_phosphatase
pfam HRGMv2_3122_21 HRGMv2_3122_21_10 7471 8385 - AP_endonuc_2
CAZyme HRGMv2_3122_21 HRGMv2_3122_21_11 8396 9430 - GH179
pfam HRGMv2_3122_21 HRGMv2_3122_21_12 9465 10334 - AP_endonuc_2
TC HRGMv2_3122_21 HRGMv2_3122_21_13 10351 11331 - 3.A.1.2.15
TC HRGMv2_3122_21 HRGMv2_3122_21_14 11357 12856 - 3.A.1.2.20
TC HRGMv2_3122_21 HRGMv2_3122_21_15 12993 14054 - 3.A.1.2.19
Gene ID: HRGMv2_3122_21_8
Type: TC
Location: 4434 - 5591 (-)
Gene ID: HRGMv2_3122_21_9
Type: pfam
Location: 5680 - 7257 (-)
Gene ID: HRGMv2_3122_21_10
Type: pfam
Location: 7471 - 8385 (-)
Gene ID: HRGMv2_3122_21_11
Type: CAZyme
Location: 8396 - 9430 (-)
Gene ID: HRGMv2_3122_21_12
Type: pfam
Location: 9465 - 10334 (-)
Gene ID: HRGMv2_3122_21_13
Type: TC
Location: 10351 - 11331 (-)
Gene ID: HRGMv2_3122_21_14
Type: TC
Location: 11357 - 12856 (-)
Gene ID: HRGMv2_3122_21_15
Type: TC
Location: 12993 - 14054 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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