Cluster: HRGMv2_3122_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3122
- CGC Family ID: CGCFAM_00692
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3122_8 | HRGMv2_3122_8_94 | 90557 | 92128 | + | 3.A.1.1.9 |
| TC | HRGMv2_3122_8 | HRGMv2_3122_8_95 | 92207 | 93187 | + | 3.A.1.1.10 |
| TC | HRGMv2_3122_8 | HRGMv2_3122_8_96 | 93200 | 94072 | + | 3.A.1.1.10 |
| CAZyme | HRGMv2_3122_8 | HRGMv2_3122_8_97 | 94109 | 99268 | + | CE1 | GH33 |
Gene ID: HRGMv2_3122_8_94
Type: TC
Location: 90557 - 92128 (+)
Type: TC
Location: 90557 - 92128 (+)
Gene ID: HRGMv2_3122_8_95
Type: TC
Location: 92207 - 93187 (+)
Type: TC
Location: 92207 - 93187 (+)
Gene ID: HRGMv2_3122_8_96
Type: TC
Location: 93200 - 94072 (+)
Type: TC
Location: 93200 - 94072 (+)
Gene ID: HRGMv2_3122_8_97
Type: CAZyme
Location: 94109 - 99268 (+)
Type: CAZyme
Location: 94109 - 99268 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerotruncus
Species
Anaerotruncus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.