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Cluster: HRGMv2_3122_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3122_3 HRGMv2_3122_3_210 241588 242820 - GT4
pfam HRGMv2_3122_3 HRGMv2_3122_3_211 243104 244555 + NAPRTase | NAPRTase_N | NAPRTase_C
pfam HRGMv2_3122_3 HRGMv2_3122_3_212 244877 246103 + ANF_receptor | Peripla_BP_5 | Peripla_BP_6
TC HRGMv2_3122_3 HRGMv2_3122_3_213 246251 247132 + 3.A.1.4.10
TC HRGMv2_3122_3 HRGMv2_3122_3_214 247138 248298 + 3.A.1.4.10
TC HRGMv2_3122_3 HRGMv2_3122_3_215 248295 249137 + 3.A.1.4.10
TC HRGMv2_3122_3 HRGMv2_3122_3_216 249130 249837 + 3.A.1.4.10
NULL(UNKNOWN) HRGMv2_3122_3 HRGMv2_3122_3_217 250122 251315 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3122_3 HRGMv2_3122_3_218 251441 253111 + 4.C.1.1.4
Gene ID: HRGMv2_3122_3_210
Type: CAZyme
Location: 241588 - 242820 (-)
Gene ID: HRGMv2_3122_3_211
Type: pfam
Location: 243104 - 244555 (+)
Gene ID: HRGMv2_3122_3_212
Type: pfam
Location: 244877 - 246103 (+)
Gene ID: HRGMv2_3122_3_213
Type: TC
Location: 246251 - 247132 (+)
Gene ID: HRGMv2_3122_3_214
Type: TC
Location: 247138 - 248298 (+)
Gene ID: HRGMv2_3122_3_215
Type: TC
Location: 248295 - 249137 (+)
Gene ID: HRGMv2_3122_3_216
Type: TC
Location: 249130 - 249837 (+)
Gene ID: HRGMv2_3122_3_217
Type:
Location: 250122 - 251315 (+)
Gene ID: HRGMv2_3122_3_218
Type: TC
Location: 251441 - 253111 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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