Genome Details
Selected Rep_genome_ID: HRGMv2_3001
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3001 | 2,594,115 | 99.32% | 0.335% | UK | Europe | HRGM |
| SW072_18_sub | 2,834,719 | 99.33% | 0.34% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3001_CGC9 | CGCFAM_00328 | Yes | 4 | 1 | |
| HRGMv2_3001_CGC3 | CGCFAM_00546 | Yes | 4 | 2 | |
| HRGMv2_3001_CGC15 | CGCFAM_02148 | Yes | 4 | 1 | |
| HRGMv2_3001_CGC7 | CGCFAM_04071 | Yes | 8 | 2 | |
| HRGMv2_3001_CGC12 | CGCFAM_10185 | Yes | 7 | 2 |
Top CAZyme Families