Genome Details
Selected Rep_genome_ID: HRGMv2_2774
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900539885
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR067613 | 2,270,105 | 92.16% | 1.36% | China | Asia | CGMR |
| HRGMv2_2774 | 2,750,836 | 99.36% | 0% | UK | Europe | HRGM |
| MGYG000003166 | 2,401,470 | 97.28% | 0% | United States | North America | UHGG |
| Rep_3087 | 2,748,548 | 96.9388% | 0.680272% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2774_CGC11 | CGCFAM_00673 | Yes | 5 | 4 | |
| HRGMv2_2774_CGC8 | CGCFAM_01236 | Yes | 6 | 1 | |
| HRGMv2_2774_CGC6 | CGCFAM_01424 | Yes | 17 | 3 | |
| HRGMv2_2774_CGC12 | CGCFAM_06169 | Yes | 4 | 1 | |
| HRGMv2_2774_CGC14 | CGCFAM_10177 | Yes | 5 | 1 |
Top CAZyme Families