Cluster: HRGMv2_2774_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2774
- CGC Family ID: CGCFAM_01236
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2774_8 | HRGMv2_2774_8_70 | 75976 | 77451 | - | GH32 |
| STP | HRGMv2_2774_8 | HRGMv2_2774_8_71 | 77476 | 79146 | - | SBP_bac_1 |
| TC | HRGMv2_2774_8 | HRGMv2_2774_8_72 | 79223 | 80128 | - | 3.A.1.1.10 |
| TC | HRGMv2_2774_8 | HRGMv2_2774_8_73 | 80142 | 81089 | - | 3.A.1.1.10 |
| TF | HRGMv2_2774_8 | HRGMv2_2774_8_74 | 81450 | 82505 | + | LacI |
| TC | HRGMv2_2774_8 | HRGMv2_2774_8_75 | 82523 | 83173 | + | 9.B.28.1.2 |
Gene ID: HRGMv2_2774_8_70
Type: CAZyme
Location: 75976 - 77451 (-)
Type: CAZyme
Location: 75976 - 77451 (-)
Gene ID: HRGMv2_2774_8_71
Type: STP
Location: 77476 - 79146 (-)
Type: STP
Location: 77476 - 79146 (-)
Gene ID: HRGMv2_2774_8_72
Type: TC
Location: 79223 - 80128 (-)
Type: TC
Location: 79223 - 80128 (-)
Gene ID: HRGMv2_2774_8_73
Type: TC
Location: 80142 - 81089 (-)
Type: TC
Location: 80142 - 81089 (-)
Gene ID: HRGMv2_2774_8_74
Type: TF
Location: 81450 - 82505 (+)
Type: TF
Location: 81450 - 82505 (+)
Gene ID: HRGMv2_2774_8_75
Type: TC
Location: 82523 - 83173 (+)
Type: TC
Location: 82523 - 83173 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900539885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.