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Cluster: HRGMv2_2774_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2774_5 HRGMv2_2774_5_56 59979 60746 - 3.A.1.7.5
TC HRGMv2_2774_5 HRGMv2_2774_5_57 60910 61767 - 3.A.1.7.2
TC HRGMv2_2774_5 HRGMv2_2774_5_58 61760 62671 - 3.A.1.7.5
pfam HRGMv2_2774_5 HRGMv2_2774_5_59 62904 63797 - PBP_like | PBP_like_2 | SBP_bac_11
pfam HRGMv2_2774_5 HRGMv2_2774_5_60 64096 64695 - Acetyltransf_1 | Acetyltransf_7
TC HRGMv2_2774_5 HRGMv2_2774_5_61 64872 66338 - 4.A.1.1.7
pfam HRGMv2_2774_5 HRGMv2_2774_5_62 66657 67571 + TRM5-TYW2_MTfase | MTS | PrmA | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
pfam HRGMv2_2774_5 HRGMv2_2774_5_63 67811 68554 + Methyltrans_RNA | PUA_4
TC HRGMv2_2774_5 HRGMv2_2774_5_64 68601 70208 - 8.A.7.1.5
pfam HRGMv2_2774_5 HRGMv2_2774_5_65 70195 71385 - Patatin
pfam HRGMv2_2774_5 HRGMv2_2774_5_66 71533 72183 + Hydrolase | HAD | HAD_2
CAZyme HRGMv2_2774_5 HRGMv2_2774_5_67 72392 73375 + GT2
TF HRGMv2_2774_5 HRGMv2_2774_5_68 73429 74151 - LytTR
CAZyme HRGMv2_2774_5 HRGMv2_2774_5_69 74214 75131 + GT2
CAZyme HRGMv2_2774_5 HRGMv2_2774_5_70 75146 76051 + GT2
peptidase HRGMv2_2774_5 HRGMv2_2774_5_71 76151 77950 - M24.UPB
TC HRGMv2_2774_5 HRGMv2_2774_5_72 78499 79737 + 9.B.10.1.1
Gene ID: HRGMv2_2774_5_56
Type: TC
Location: 59979 - 60746 (-)
Gene ID: HRGMv2_2774_5_57
Type: TC
Location: 60910 - 61767 (-)
Gene ID: HRGMv2_2774_5_58
Type: TC
Location: 61760 - 62671 (-)
Gene ID: HRGMv2_2774_5_59
Type: pfam
Location: 62904 - 63797 (-)
Gene ID: HRGMv2_2774_5_60
Type: pfam
Location: 64096 - 64695 (-)
Gene ID: HRGMv2_2774_5_61
Type: TC
Location: 64872 - 66338 (-)
Gene ID: HRGMv2_2774_5_62
Type: pfam
Location: 66657 - 67571 (+)
Gene ID: HRGMv2_2774_5_63
Type: pfam
Location: 67811 - 68554 (+)
Gene ID: HRGMv2_2774_5_64
Type: TC
Location: 68601 - 70208 (-)
Gene ID: HRGMv2_2774_5_65
Type: pfam
Location: 70195 - 71385 (-)
Gene ID: HRGMv2_2774_5_66
Type: pfam
Location: 71533 - 72183 (+)
Gene ID: HRGMv2_2774_5_67
Type: CAZyme
Location: 72392 - 73375 (+)
Gene ID: HRGMv2_2774_5_68
Type: TF
Location: 73429 - 74151 (-)
Gene ID: HRGMv2_2774_5_69
Type: CAZyme
Location: 74214 - 75131 (+)
Gene ID: HRGMv2_2774_5_70
Type: CAZyme
Location: 75146 - 76051 (+)
Gene ID: HRGMv2_2774_5_71
Type: peptidase
Location: 76151 - 77950 (-)
Gene ID: HRGMv2_2774_5_72
Type: TC
Location: 78499 - 79737 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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