Genome Details
Selected Rep_genome_ID: HRGMv2_2723
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus massiliensis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C137.bin_43 | 2,558,588 | 97.99% | 1.43% | China(Inner Mongolia) | Asia | IMGG |
| CGMR030284 | 2,473,700 | 95.53% | 1.34% | China | Asia | CGMR |
| HRGMv2_2723 | 2,394,493 | 97.98% | 0.671% | South Korea | Asia | HRGM |
| MGYG000002625 | 2,526,414 | 95.61% | 0.67% | China | Asia | UHGG |
| Rep_3383 | 2,686,681 | 97.3154% | 1.34228% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2723_CGC8 | CGCFAM_00397 | Yes | 9 | 3 | |
| HRGMv2_2723_CGC14 | CGCFAM_00884 | Yes | 3 | 1 | |
| HRGMv2_2723_CGC15 | CGCFAM_01166 | Yes | 8 | 1 | |
| HRGMv2_2723_CGC2 | CGCFAM_02064 | Yes | 6 | 1 | |
| HRGMv2_2723_CGC16 | CGCFAM_03497 | Yes | 4 | 1 | |
| HRGMv2_2723_CGC11 | CGCFAM_04579 | Yes | 3 | 1 | |
| HRGMv2_2723_CGC18 | CGCFAM_04627 | Yes | 6 | 1 | |
| HRGMv2_2723_CGC10 | CGCFAM_05269 | Yes | 10 | 1 |
Top CAZyme Families