Cluster: HRGMv2_2723_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2723
- CGC Family ID: CGCFAM_04627
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2723_43 | HRGMv2_2723_43_13 | 7480 | 8403 | - | 9.B.70.1.1 |
| CAZyme | HRGMv2_2723_43 | HRGMv2_2723_43_14 | 9168 | 10313 | - | CE9 |
| pfam | HRGMv2_2723_43 | HRGMv2_2723_43_15 | 10342 | 11064 | - | Methyltransf_4 |
| pfam | HRGMv2_2723_43 | HRGMv2_2723_43_16 | 11200 | 12498 | - | SDH_alpha |
| TC | HRGMv2_2723_43 | HRGMv2_2723_43_17 | 12683 | 13489 | - | 3.A.1.34.1 |
| TC | HRGMv2_2723_43 | HRGMv2_2723_43_18 | 13483 | 13935 | - | 3.A.1.34.1 |
Gene ID: HRGMv2_2723_43_13
Type: TC
Location: 7480 - 8403 (-)
Type: TC
Location: 7480 - 8403 (-)
Gene ID: HRGMv2_2723_43_14
Type: CAZyme
Location: 9168 - 10313 (-)
Type: CAZyme
Location: 9168 - 10313 (-)
Gene ID: HRGMv2_2723_43_15
Type: pfam
Location: 10342 - 11064 (-)
Type: pfam
Location: 10342 - 11064 (-)
Gene ID: HRGMv2_2723_43_16
Type: pfam
Location: 11200 - 12498 (-)
Type: pfam
Location: 11200 - 12498 (-)
Gene ID: HRGMv2_2723_43_17
Type: TC
Location: 12683 - 13489 (-)
Type: TC
Location: 12683 - 13489 (-)
Gene ID: HRGMv2_2723_43_18
Type: TC
Location: 13483 - 13935 (-)
Type: TC
Location: 13483 - 13935 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.