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Cluster: HRGMv2_2723_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2723_9 HRGMv2_2723_9_8 8706 9533 + 2.A.79.1.5
TC HRGMv2_2723_9 HRGMv2_2723_9_9 9549 9998 + 2.A.79.1.5
TC HRGMv2_2723_9 HRGMv2_2723_9_10 10454 12352 + 9.B.18.2.1
NULL(UNKNOWN) HRGMv2_2723_9 HRGMv2_2723_9_11 12368 13819 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2723_9 HRGMv2_2723_9_12 13886 15085 + Aminotran_1_2
TC HRGMv2_2723_9 HRGMv2_2723_9_13 15086 15778 + 9.B.18.1.2
CAZyme HRGMv2_2723_9 HRGMv2_2723_9_14 15817 17082 + GT4
CAZyme HRGMv2_2723_9 HRGMv2_2723_9_15 17135 18277 + GT4
CAZyme HRGMv2_2723_9 HRGMv2_2723_9_16 18290 19492 + GT4
Gene ID: HRGMv2_2723_9_8
Type: TC
Location: 8706 - 9533 (+)
Gene ID: HRGMv2_2723_9_9
Type: TC
Location: 9549 - 9998 (+)
Gene ID: HRGMv2_2723_9_10
Type: TC
Location: 10454 - 12352 (+)
Gene ID: HRGMv2_2723_9_11
Type:
Location: 12368 - 13819 (+)
Gene ID: HRGMv2_2723_9_12
Type: STP
Location: 13886 - 15085 (+)
Gene ID: HRGMv2_2723_9_13
Type: TC
Location: 15086 - 15778 (+)
Gene ID: HRGMv2_2723_9_14
Type: CAZyme
Location: 15817 - 17082 (+)
Gene ID: HRGMv2_2723_9_15
Type: CAZyme
Location: 17135 - 18277 (+)
Gene ID: HRGMv2_2723_9_16
Type: CAZyme
Location: 18290 - 19492 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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