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Cluster: HRGMv2_2723_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2723_20 HRGMv2_2723_20_1 1 1365 - 3.A.1.106.15
TF HRGMv2_2723_20 HRGMv2_2723_20_2 1362 2501 - HTH_3
TC HRGMv2_2723_20 HRGMv2_2723_20_3 2667 4034 - 2.A.66.1.32
TF HRGMv2_2723_20 HRGMv2_2723_20_4 4027 4476 - MarR
NULL(UNKNOWN) HRGMv2_2723_20 HRGMv2_2723_20_5 4610 5128 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2723_20 HRGMv2_2723_20_6 5490 7127 + 2.A.58.2.2
NULL(UNKNOWN) HRGMv2_2723_20 HRGMv2_2723_20_7 7195 7629 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2723_20 HRGMv2_2723_20_8 7667 8281 - GH25
Gene ID: HRGMv2_2723_20_1
Type: TC
Location: 1 - 1365 (-)
Gene ID: HRGMv2_2723_20_2
Type: TF
Location: 1362 - 2501 (-)
Gene ID: HRGMv2_2723_20_3
Type: TC
Location: 2667 - 4034 (-)
Gene ID: HRGMv2_2723_20_4
Type: TF
Location: 4027 - 4476 (-)
Gene ID: HRGMv2_2723_20_5
Type:
Location: 4610 - 5128 (-)
Gene ID: HRGMv2_2723_20_6
Type: TC
Location: 5490 - 7127 (+)
Gene ID: HRGMv2_2723_20_7
Type:
Location: 7195 - 7629 (-)
Gene ID: HRGMv2_2723_20_8
Type: CAZyme
Location: 7667 - 8281 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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