Cluster: HRGMv2_2723_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2723
- CGC Family ID: CGCFAM_02064
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2723_1 | HRGMv2_2723_1_61 | 63978 | 64712 | - | 3.A.1.3.10 |
| TC | HRGMv2_2723_1 | HRGMv2_2723_1_62 | 64743 | 65405 | - | 3.A.1.3.10 |
| STP | HRGMv2_2723_1 | HRGMv2_2723_1_63 | 65583 | 66395 | - | SBP_bac_3 |
| pfam | HRGMv2_2723_1 | HRGMv2_2723_1_64 | 66509 | 67330 | - | VCA0040-like |
| TC | HRGMv2_2723_1 | HRGMv2_2723_1_65 | 67485 | 68528 | - | 4.D.2.1.7 |
| CAZyme | HRGMv2_2723_1 | HRGMv2_2723_1_66 | 68525 | 69643 | - | GT4 |
Gene ID: HRGMv2_2723_1_61
Type: TC
Location: 63978 - 64712 (-)
Type: TC
Location: 63978 - 64712 (-)
Gene ID: HRGMv2_2723_1_62
Type: TC
Location: 64743 - 65405 (-)
Type: TC
Location: 64743 - 65405 (-)
Gene ID: HRGMv2_2723_1_63
Type: STP
Location: 65583 - 66395 (-)
Type: STP
Location: 65583 - 66395 (-)
Gene ID: HRGMv2_2723_1_64
Type: pfam
Location: 66509 - 67330 (-)
Type: pfam
Location: 66509 - 67330 (-)
Gene ID: HRGMv2_2723_1_65
Type: TC
Location: 67485 - 68528 (-)
Type: TC
Location: 67485 - 68528 (-)
Gene ID: HRGMv2_2723_1_66
Type: CAZyme
Location: 68525 - 69643 (-)
Type: CAZyme
Location: 68525 - 69643 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.