Genome Details
Selected Rep_genome_ID: HRGMv2_2533
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CY
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2533 | 1,776,768 | 95.88% | 1.724% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2533_CGC11 | CGCFAM_00311 | Yes | 9 | 6 | host glycan |
| HRGMv2_2533_CGC1 | CGCFAM_00402 | Yes | 22 | 5 | |
| PUL0519_HRGMv2_2533_C14 | CGCFAM_00580 | Yes | 6 | 2 | alpha-glucan |
| HRGMv2_2533_CGC18 | CGCFAM_02339 | Yes | 5 | 2 | |
| HRGMv2_2533_CGC9 | CGCFAM_02736 | Yes | 5 | 1 | |
| HRGMv2_2533_CGC3 | CGCFAM_04335 | Yes | 5 | 1 | |
| HRGMv2_2533_CGC15 | CGCFAM_10107 | Yes | 3 | 1 |
Top CAZyme Families