Cluster: HRGMv2_2533_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2533
- CGC Family ID: CGCFAM_02339
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2533_155 | HRGMv2_2533_155_1 | 2 | 859 | - | GT4 |
| pfam | HRGMv2_2533_155 | HRGMv2_2533_155_2 | 861 | 1259 | - | CTP_transf_like |
| CAZyme | HRGMv2_2533_155 | HRGMv2_2533_155_3 | 1256 | 2089 | - | GT2 |
| pfam | HRGMv2_2533_155 | HRGMv2_2533_155_4 | 2106 | 3206 | - | EpsG |
| TC | HRGMv2_2533_155 | HRGMv2_2533_155_5 | 3242 | 3895 | - | 8.A.3.2.1 |
Gene ID: HRGMv2_2533_155_1
Type: CAZyme
Location: 2 - 859 (-)
Type: CAZyme
Location: 2 - 859 (-)
Gene ID: HRGMv2_2533_155_2
Type: pfam
Location: 861 - 1259 (-)
Type: pfam
Location: 861 - 1259 (-)
Gene ID: HRGMv2_2533_155_3
Type: CAZyme
Location: 1256 - 2089 (-)
Type: CAZyme
Location: 1256 - 2089 (-)
Gene ID: HRGMv2_2533_155_4
Type: pfam
Location: 2106 - 3206 (-)
Type: pfam
Location: 2106 - 3206 (-)
Gene ID: HRGMv2_2533_155_5
Type: TC
Location: 3242 - 3895 (-)
Type: TC
Location: 3242 - 3895 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CY
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.