Cluster: HRGMv2_2533_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2533
- CGC Family ID: CGCFAM_02736
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2533_17 | HRGMv2_2533_17_1 | 39 | 911 | - | 3.A.14.1.1 |
| TC | HRGMv2_2533_17 | HRGMv2_2533_17_2 | 1003 | 1944 | - | 3.A.14.1.2 |
| pfam | HRGMv2_2533_17 | HRGMv2_2533_17_3 | 2021 | 2386 | - | DUF1033 |
| pfam | HRGMv2_2533_17 | HRGMv2_2533_17_4 | 2537 | 3595 | - | ADH_zinc_N | ADH_N |
| CAZyme | HRGMv2_2533_17 | HRGMv2_2533_17_5 | 3758 | 4909 | - | CE9 |
Gene ID: HRGMv2_2533_17_1
Type: TC
Location: 39 - 911 (-)
Type: TC
Location: 39 - 911 (-)
Gene ID: HRGMv2_2533_17_2
Type: TC
Location: 1003 - 1944 (-)
Type: TC
Location: 1003 - 1944 (-)
Gene ID: HRGMv2_2533_17_3
Type: pfam
Location: 2021 - 2386 (-)
Type: pfam
Location: 2021 - 2386 (-)
Gene ID: HRGMv2_2533_17_4
Type: pfam
Location: 2537 - 3595 (-)
Type: pfam
Location: 2537 - 3595 (-)
Gene ID: HRGMv2_2533_17_5
Type: CAZyme
Location: 3758 - 4909 (-)
Type: CAZyme
Location: 3758 - 4909 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CY
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.