Cluster: HRGMv2_2533_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2533
- CGC Family ID: CGCFAM_04335
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2533_3 | HRGMv2_2533_3_1 | 1 | 2517 | - | GH2 |
| peptidase | HRGMv2_2533_3 | HRGMv2_2533_3_2 | 2702 | 3601 | - | I87.UPW |
| TC | HRGMv2_2533_3 | HRGMv2_2533_3_3 | 3752 | 5257 | - | 3.A.1.15.3 |
| TC | HRGMv2_2533_3 | HRGMv2_2533_3_4 | 5267 | 6073 | - | 3.A.1.15.3 |
| TC | HRGMv2_2533_3 | HRGMv2_2533_3_5 | 6066 | 6770 | - | 3.A.1.15.3 |
Gene ID: HRGMv2_2533_3_1
Type: CAZyme
Location: 1 - 2517 (-)
Type: CAZyme
Location: 1 - 2517 (-)
Gene ID: HRGMv2_2533_3_2
Type: peptidase
Location: 2702 - 3601 (-)
Type: peptidase
Location: 2702 - 3601 (-)
Gene ID: HRGMv2_2533_3_3
Type: TC
Location: 3752 - 5257 (-)
Type: TC
Location: 3752 - 5257 (-)
Gene ID: HRGMv2_2533_3_4
Type: TC
Location: 5267 - 6073 (-)
Type: TC
Location: 5267 - 6073 (-)
Gene ID: HRGMv2_2533_3_5
Type: TC
Location: 6066 - 6770 (-)
Type: TC
Location: 6066 - 6770 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CY
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.