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Genome Details

Selected Rep_genome_ID: HRGMv2_2483
Total Genomes Found: 12
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Streptococcus
→
Species
Streptococcus pasteurianus
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A126.CMAG_1 2,160,983 100% 0.19% China(Inner Mongolia) Asia IMGG
CGMR097154 2,120,815 100% 0% China Asia CGMR
GH108_bin.60 2,240,047 100% 0% NA Africa H3AfricaPhase2
HRGMv2_2483 2,273,076 100% 0% Malaysia Asia HRGM
SPMP09_bin.6 2,221,337 93.87% 0% Singapore Asia SPMP
SPMP33_bin.34 2,249,696 97.82% 2.62% Singapore Asia SPMP
SPMP34_bin.53 2,152,927 99.38% 0.37% Singapore Asia SPMP
SPMP39_bin.6 2,292,416 98.43% 0.75% Singapore Asia SPMP
SPMP49_bin.101 2,062,883 98.12% 0.56% Singapore Asia SPMP
SPMP50_bin.64 2,046,952 96.15% 0.5% Singapore Asia SPMP
SPMP58_bin.26 2,164,271 97.78% 0.56% Singapore Asia SPMP
SPMP91_bin.25 2,098,782 99.63% 0.19% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_2483_CGC19 CGCFAM_00002 Yes 6 2
HRGMv2_2483_CGC25 CGCFAM_00012 Yes 3 1 host glycan/beta-glucan
HRGMv2_2483_CGC29 CGCFAM_00027 Yes 5 1
HRGMv2_2483_CGC8 CGCFAM_00055 Yes 13 5
HRGMv2_2483_CGC24 CGCFAM_00067 Yes 6 2 galactan
HRGMv2_2483_CGC18 CGCFAM_00205 Yes 4 1
HRGMv2_2483_CGC11 CGCFAM_00276 Yes 4 1
HRGMv2_2483_CGC22 CGCFAM_01180 Yes 3 1
HRGMv2_2483_CGC20 CGCFAM_01747 Yes 18 4
HRGMv2_2483_CGC1 CGCFAM_02915 Yes 4 1
HRGMv2_2483_CGC23 CGCFAM_04138 Yes 14 5
HRGMv2_2483_CGC3 CGCFAM_04999 Yes 5 2
HRGMv2_2483_CGC7 CGCFAM_06131 Yes 18 2
HRGMv2_2483_CGC15 CGCFAM_08843 Yes 4 2
HRGMv2_2483_CGC4 CGCFAM_10098 Yes 8 4
Top CAZyme Families