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Cluster: HRGMv2_2483_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2483_1 HRGMv2_2483_1_494 507445 508944 - 3.A.1.121.2
TC HRGMv2_2483_1 HRGMv2_2483_1_495 509349 510089 - 3.A.1.3.25
TC HRGMv2_2483_1 HRGMv2_2483_1_496 510089 512326 - 3.A.1.3.25
pfam HRGMv2_2483_1 HRGMv2_2483_1_497 512515 514506 + Helicase_C | UVR | ResIII | UvrB | UvrB_inter
STP HRGMv2_2483_1 HRGMv2_2483_1_498 514597 515061 + NUDIX
TC HRGMv2_2483_1 HRGMv2_2483_1_499 515171 516007 - 3.A.1.1.27
TC HRGMv2_2483_1 HRGMv2_2483_1_500 516007 517374 - 3.A.1.1.27
TC HRGMv2_2483_1 HRGMv2_2483_1_501 517504 518760 - 3.A.1.1.27
TF HRGMv2_2483_1 HRGMv2_2483_1_502 519080 520105 + LacI
CAZyme HRGMv2_2483_1 HRGMv2_2483_1_503 520284 521825 + GH77
CAZyme HRGMv2_2483_1 HRGMv2_2483_1_504 521815 524079 + GT35
TC HRGMv2_2483_1 HRGMv2_2483_1_505 524245 525084 + 3.A.1.3.2
TC HRGMv2_2483_1 HRGMv2_2483_1_506 525096 525911 + 3.A.1.3.2
STP HRGMv2_2483_1 HRGMv2_2483_1_507 525997 527109 + Aminotran_1_2
TC HRGMv2_2483_1 HRGMv2_2483_1_508 527225 528046 + 3.A.1.3.2
pfam HRGMv2_2483_1 HRGMv2_2483_1_509 528648 529025 + Glyoxalase
pfam HRGMv2_2483_1 HRGMv2_2483_1_510 529230 529436 + Ribosomal_S21
TC HRGMv2_2483_1 HRGMv2_2483_1_511 529498 529875 - 1.A.22.1.5
Gene ID: HRGMv2_2483_1_494
Type: TC
Location: 507445 - 508944 (-)
Gene ID: HRGMv2_2483_1_495
Type: TC
Location: 509349 - 510089 (-)
Gene ID: HRGMv2_2483_1_496
Type: TC
Location: 510089 - 512326 (-)
Gene ID: HRGMv2_2483_1_497
Type: pfam
Location: 512515 - 514506 (+)
Gene ID: HRGMv2_2483_1_498
Type: STP
Location: 514597 - 515061 (+)
Gene ID: HRGMv2_2483_1_499
Type: TC
Location: 515171 - 516007 (-)
Gene ID: HRGMv2_2483_1_500
Type: TC
Location: 516007 - 517374 (-)
Gene ID: HRGMv2_2483_1_501
Type: TC
Location: 517504 - 518760 (-)
Gene ID: HRGMv2_2483_1_502
Type: TF
Location: 519080 - 520105 (+)
Gene ID: HRGMv2_2483_1_503
Type: CAZyme
Location: 520284 - 521825 (+)
Gene ID: HRGMv2_2483_1_504
Type: CAZyme
Location: 521815 - 524079 (+)
Gene ID: HRGMv2_2483_1_505
Type: TC
Location: 524245 - 525084 (+)
Gene ID: HRGMv2_2483_1_506
Type: TC
Location: 525096 - 525911 (+)
Gene ID: HRGMv2_2483_1_507
Type: STP
Location: 525997 - 527109 (+)
Gene ID: HRGMv2_2483_1_508
Type: TC
Location: 527225 - 528046 (+)
Gene ID: HRGMv2_2483_1_509
Type: pfam
Location: 528648 - 529025 (+)
Gene ID: HRGMv2_2483_1_510
Type: pfam
Location: 529230 - 529436 (+)
Gene ID: HRGMv2_2483_1_511
Type: TC
Location: 529498 - 529875 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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