Genome Details
Selected Rep_genome_ID: HRGMv2_1953
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A ulcerans_A
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR095104 | 3,531,651 | 100% | 2.25% | China | Asia | CGMR |
| HRGMv2_1953 | 3,300,652 | 100% | 2.247% | Japan | Asia | HRGM |
| Rep_1365 | 3,729,499 | 98.8764% | 2.24719% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1953_CGC19 | CGCFAM_00003 | Yes | 4 | 1 | |
| HRGMv2_1953_CGC11 | CGCFAM_00004 | Yes | 11 | 4 | alpha-glucan |
| HRGMv2_1953_CGC6 | CGCFAM_00932 | Yes | 4 | 1 | |
| HRGMv2_1953_CGC1 | CGCFAM_05387 | Yes | 7 | 1 | |
| HRGMv2_1953_CGC4 | CGCFAM_08222 | Yes | 13 | 1 |
Top CAZyme Families