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Genome Details

Selected Rep_genome_ID: HRGMv2_1623
Total Genomes Found: 7
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_1623 1,884,420 99.19% 0% Italy(Sardinia) Europe HRGM
MGYG000001168 1,867,940 99.19% 0.2% Austria Europe UHGG
MurphyR_2019_SRR7351803_bin.5 1,861,392 99.19% 0% New_Zealand Oceania ELGG
Rep_1819 1,858,891 99.1936% 0.806452% NA NA WIS
SPMP01_bin.49 1,756,283 96.24% 1.21% Singapore Asia SPMP
SPMP31_bin.177 1,869,651 98.92% 0% Singapore Asia SPMP
SW044_48 1,842,572 99.19% 0% NA Africa H3AfricaPhase2
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_1623_CGC8 CGCFAM_00115 Yes 11 5
HRGMv2_1623_CGC2 CGCFAM_00520 Yes 4 1
HRGMv2_1623_CGC6 CGCFAM_00594 Yes 3 1
HRGMv2_1623_CGC9 CGCFAM_00963 Yes 9 3
HRGMv2_1623_CGC4 CGCFAM_02880 Yes 7 1
HRGMv2_1623_CGC3 CGCFAM_05286 Yes 4 1
HRGMv2_1623_CGC5 CGCFAM_09318 Yes 4 1
HRGMv2_1623_CGC7 CGCFAM_09822 Yes 4 1
Top CAZyme Families