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Cluster: HRGMv2_1623_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1623_6 HRGMv2_1623_6_36 39541 40746 + GT2
TF HRGMv2_1623_6 HRGMv2_1623_6_37 41149 42357 + 0043095
NULL(UNKNOWN) HRGMv2_1623_6 HRGMv2_1623_6_38 42781 43656 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1623_6 HRGMv2_1623_6_39 43958 44740 + 3.A.1.103.6
TC HRGMv2_1623_6 HRGMv2_1623_6_40 44750 46537 + 3.A.1.103.5
pfam HRGMv2_1623_6 HRGMv2_1623_6_41 46556 47050 + CTP_transf_like
pfam HRGMv2_1623_6 HRGMv2_1623_6_42 47069 48223 - LicD
CAZyme HRGMv2_1623_6 HRGMv2_1623_6_43 48326 49390 + GT2
CAZyme HRGMv2_1623_6 HRGMv2_1623_6_44 49408 50595 + GT2
Gene ID: HRGMv2_1623_6_36
Type: CAZyme
Location: 39541 - 40746 (+)
Gene ID: HRGMv2_1623_6_37
Type: TF
Location: 41149 - 42357 (+)
Gene ID: HRGMv2_1623_6_38
Type:
Location: 42781 - 43656 (+)
Gene ID: HRGMv2_1623_6_39
Type: TC
Location: 43958 - 44740 (+)
Gene ID: HRGMv2_1623_6_40
Type: TC
Location: 44750 - 46537 (+)
Gene ID: HRGMv2_1623_6_41
Type: pfam
Location: 46556 - 47050 (+)
Gene ID: HRGMv2_1623_6_42
Type: pfam
Location: 47069 - 48223 (-)
Gene ID: HRGMv2_1623_6_43
Type: CAZyme
Location: 48326 - 49390 (+)
Gene ID: HRGMv2_1623_6_44
Type: CAZyme
Location: 49408 - 50595 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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