Cluster: HRGMv2_1623_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1623
- CGC Family ID: CGCFAM_05286
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1623_2 | HRGMv2_1623_2_267 | 309075 | 309776 | + | 3.A.1.125.1 |
| TC | HRGMv2_1623_2 | HRGMv2_1623_2_268 | 309783 | 312893 | + | 3.A.1.137.2 |
| TC | HRGMv2_1623_2 | HRGMv2_1623_2_269 | 313193 | 314329 | - | 9.B.146.1.7 |
| CAZyme | HRGMv2_1623_2 | HRGMv2_1623_2_270 | 314772 | 315836 | + | GT2 |
Gene ID: HRGMv2_1623_2_267
Type: TC
Location: 309075 - 309776 (+)
Type: TC
Location: 309075 - 309776 (+)
Gene ID: HRGMv2_1623_2_268
Type: TC
Location: 309783 - 312893 (+)
Type: TC
Location: 309783 - 312893 (+)
Gene ID: HRGMv2_1623_2_269
Type: TC
Location: 313193 - 314329 (-)
Type: TC
Location: 313193 - 314329 (-)
Gene ID: HRGMv2_1623_2_270
Type: CAZyme
Location: 314772 - 315836 (+)
Type: CAZyme
Location: 314772 - 315836 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Anaerotardibacter
Species
Anaerotardibacter sp000436075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1623_2_268 | vegetarian > vegan | 1.01547 | 0.04492 |
| HRGMv2_1623_2_270 | vegetarian > omnivore | 1.83979 | 0.00180 |