Cluster: HRGMv2_1623_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1623
- CGC Family ID: CGCFAM_00594
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1623_3 | HRGMv2_1623_3_75 | 88252 | 89112 | + | 9.B.18.1.3 |
| TC | HRGMv2_1623_3 | HRGMv2_1623_3_76 | 89112 | 89900 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_1623_3 | HRGMv2_1623_3_77 | 89908 | 90678 | + | GT26 |
Gene ID: HRGMv2_1623_3_75
Type: TC
Location: 88252 - 89112 (+)
Type: TC
Location: 88252 - 89112 (+)
Gene ID: HRGMv2_1623_3_76
Type: TC
Location: 89112 - 89900 (+)
Type: TC
Location: 89112 - 89900 (+)
Gene ID: HRGMv2_1623_3_77
Type: CAZyme
Location: 89908 - 90678 (+)
Type: CAZyme
Location: 89908 - 90678 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Anaerotardibacter
Species
Anaerotardibacter sp000436075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1623_3_76 | vegetarian > omnivore | 3.73132 | 0.00180 |
| HRGMv2_1623_3_77 | vegetarian > omnivore | 4.88746 | 0.00180 |