Genome Details
Selected Rep_genome_ID: HRGMv2_0706
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Coproplasma
Species
Coproplasma stercorigallinarum
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0706 | 2,009,562 | 95.16% | 0.026% | Italy(Sardinia) | Europe | HRGM |
| Rep_2538 | 1,824,040 | 91.0924% | 0.0260146% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0706_CGC9 | CGCFAM_00036 | Yes | 8 | 1 | |
| HRGMv2_0706_CGC7 | CGCFAM_00078 | Yes | 3 | 1 | galactan |
| HRGMv2_0706_CGC8 | CGCFAM_00233 | Yes | 6 | 3 | |
| HRGMv2_0706_CGC2 | CGCFAM_00245 | Yes | 5 | 1 | |
| HRGMv2_0706_CGC3 | CGCFAM_00438 | Yes | 9 | 3 | |
| HRGMv2_0706_CGC5 | CGCFAM_01320 | Yes | 5 | 2 |
Top CAZyme Families