Cluster: HRGMv2_0706_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0706
- CGC Family ID: CGCFAM_01320
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0706_4 | HRGMv2_0706_4_83 | 90926 | 92062 | - | GH105 |
| CAZyme | HRGMv2_0706_4 | HRGMv2_0706_4_84 | 92072 | 93613 | - | GH28 |
| NULL(UNKNOWN) | HRGMv2_0706_4 | HRGMv2_0706_4_85 | 93826 | 94557 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0706_4 | HRGMv2_0706_4_86 | 94632 | 95261 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0706_4 | HRGMv2_0706_4_87 | 95270 | 96337 | - | 3.A.1.1.22 |
Gene ID: HRGMv2_0706_4_83
Type: CAZyme
Location: 90926 - 92062 (-)
Type: CAZyme
Location: 90926 - 92062 (-)
Gene ID: HRGMv2_0706_4_84
Type: CAZyme
Location: 92072 - 93613 (-)
Type: CAZyme
Location: 92072 - 93613 (-)
Gene ID: HRGMv2_0706_4_85
Type:
Location: 93826 - 94557 (-)
Type:
Location: 93826 - 94557 (-)
Gene ID: HRGMv2_0706_4_86
Type:
Location: 94632 - 95261 (-)
Type:
Location: 94632 - 95261 (-)
Gene ID: HRGMv2_0706_4_87
Type: TC
Location: 95270 - 96337 (-)
Type: TC
Location: 95270 - 96337 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Coproplasma
Species
Coproplasma stercorigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.