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Cluster: HRGMv2_0706_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0706_11 HRGMv2_0706_11_30 33463 34086 + 2.A.115.2.14
TC HRGMv2_0706_11 HRGMv2_0706_11_31 34210 35712 - 3.A.1.121.2
pfam HRGMv2_0706_11 HRGMv2_0706_11_32 36230 37345 + Amino_oxidase | GLF | NAD_binding_8
pfam HRGMv2_0706_11 HRGMv2_0706_11_33 37625 39379 + Glft2_N
TC HRGMv2_0706_11 HRGMv2_0706_11_34 39563 40402 + 9.B.18.1.3
CAZyme HRGMv2_0706_11 HRGMv2_0706_11_35 40436 41533 + GT4
TC HRGMv2_0706_11 HRGMv2_0706_11_36 41839 42669 + 3.A.1.103.4
TC HRGMv2_0706_11 HRGMv2_0706_11_37 42679 43512 + 3.A.1.103.1
Gene ID: HRGMv2_0706_11_30
Type: TC
Location: 33463 - 34086 (+)
Gene ID: HRGMv2_0706_11_31
Type: TC
Location: 34210 - 35712 (-)
Gene ID: HRGMv2_0706_11_32
Type: pfam
Location: 36230 - 37345 (+)
Gene ID: HRGMv2_0706_11_33
Type: pfam
Location: 37625 - 39379 (+)
Gene ID: HRGMv2_0706_11_34
Type: TC
Location: 39563 - 40402 (+)
Gene ID: HRGMv2_0706_11_35
Type: CAZyme
Location: 40436 - 41533 (+)
Gene ID: HRGMv2_0706_11_36
Type: TC
Location: 41839 - 42669 (+)
Gene ID: HRGMv2_0706_11_37
Type: TC
Location: 42679 - 43512 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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