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Cluster: HRGMv2_0706_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0706_3 HRGMv2_0706_3_103 110205 112439 - GT35
TC HRGMv2_0706_3 HRGMv2_0706_3_104 112451 114394 - 3.A.1.1.26
TC HRGMv2_0706_3 HRGMv2_0706_3_105 114398 115249 - 3.A.1.1.27
TC HRGMv2_0706_3 HRGMv2_0706_3_106 115246 116652 - 3.A.1.1.27
STP HRGMv2_0706_3 HRGMv2_0706_3_107 116664 118100 - SBP_bac_1
CAZyme HRGMv2_0706_3 HRGMv2_0706_3_108 118117 119796 - CBM34 | GH13_20
TF HRGMv2_0706_3 HRGMv2_0706_3_109 119866 120666 + LacI
pfam HRGMv2_0706_3 HRGMv2_0706_3_110 120732 122528 - Flg_new
CAZyme HRGMv2_0706_3 HRGMv2_0706_3_111 122554 123528 - CBM20
Gene ID: HRGMv2_0706_3_103
Type: CAZyme
Location: 110205 - 112439 (-)
Gene ID: HRGMv2_0706_3_104
Type: TC
Location: 112451 - 114394 (-)
Gene ID: HRGMv2_0706_3_105
Type: TC
Location: 114398 - 115249 (-)
Gene ID: HRGMv2_0706_3_106
Type: TC
Location: 115246 - 116652 (-)
Gene ID: HRGMv2_0706_3_107
Type: STP
Location: 116664 - 118100 (-)
Gene ID: HRGMv2_0706_3_108
Type: CAZyme
Location: 118117 - 119796 (-)
Gene ID: HRGMv2_0706_3_109
Type: TF
Location: 119866 - 120666 (+)
Gene ID: HRGMv2_0706_3_110
Type: pfam
Location: 120732 - 122528 (-)
Gene ID: HRGMv2_0706_3_111
Type: CAZyme
Location: 122554 - 123528 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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