Genome Details
Selected Rep_genome_ID: HRGMv2_0474
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Amulumruptor
Species
Amulumruptor caecigallinarius
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0474 | 2,698,467 | 99.43% | 0.125% | Italy | Europe | HRGM |
| Rep_345 | 2,604,985 | 98.6792% | 0.125786% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0474_CGC5 | CGCFAM_00001 | Yes | 4 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0474_CGC12 | CGCFAM_00132 | Yes | 4 | 1 | |
| HRGMv2_0474_CGC13 | CGCFAM_00175 | Yes | 13 | 3 | alpha-glucan |
| HRGMv2_0474_CGC22 | CGCFAM_00184 | Yes | 11 | 2 | |
| HRGMv2_0474_CGC7 | CGCFAM_00188 | Yes | 3 | 1 | |
| HRGMv2_0474_CGC4 | CGCFAM_00324 | Yes | 3 | 1 | |
| HRGMv2_0474_CGC20 | CGCFAM_00599 | Yes | 7 | 1 | |
| HRGMv2_0474_CGC24 | CGCFAM_00743 | Yes | 3 | 1 | |
| HRGMv2_0474_CGC23 | CGCFAM_04005 | Yes | 9 | 2 | |
| HRGMv2_0474_CGC14 | CGCFAM_06006 | Yes | 6 | 1 | |
| HRGMv2_0474_CGC15 | CGCFAM_06007 | Yes | 4 | 1 | |
| HRGMv2_0474_CGC3 | CGCFAM_06008 | Yes | 3 | 1 | |
| HRGMv2_0474_CGC8 | CGCFAM_06009 | Yes | 11 | 5 | |
| HRGMv2_0474_CGC10 | CGCFAM_09691 | Yes | 8 | 3 | |
| HRGMv2_0474_CGC19 | CGCFAM_09692 | Yes | 4 | 2 |
Top CAZyme Families