Cluster: HRGMv2_0474_CGC13
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: HRGMv2_0474
- CGC Family ID: CGCFAM_00175
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0474_4 | HRGMv2_0474_4_151 | 175093 | 176469 | - | 2.A.66.1.25 |
| CAZyme | HRGMv2_0474_4 | HRGMv2_0474_4_152 | 177092 | 179116 | - | GH13_14 |
| NULL(UNKNOWN) | HRGMv2_0474_4 | HRGMv2_0474_4_153 | 179334 | 179669 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0474_4 | HRGMv2_0474_4_154 | 179829 | 181502 | + | DUF6377 |
| TC | HRGMv2_0474_4 | HRGMv2_0474_4_155 | 181724 | 184690 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0474_4 | HRGMv2_0474_4_156 | 184712 | 186508 | + | SusD_RagB |
| pfam | HRGMv2_0474_4 | HRGMv2_0474_4_157 | 186521 | 187966 | + | CBM26 |
| CAZyme | HRGMv2_0474_4 | HRGMv2_0474_4_158 | 187963 | 189306 | + | GH13 |
| CAZyme | HRGMv2_0474_4 | HRGMv2_0474_4_159 | 189341 | 191440 | + | GH97 |
| NULL(UNKNOWN) | HRGMv2_0474_4 | HRGMv2_0474_4_160 | 191593 | 191706 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0474_4 | HRGMv2_0474_4_161 | 191757 | 192518 | + | 2.A.115.2.8 |
| TC | HRGMv2_0474_4 | HRGMv2_0474_4_162 | 192552 | 193166 | + | 2.A.51.1.6 |
| TC | HRGMv2_0474_4 | HRGMv2_0474_4_163 | 193163 | 193735 | + | 2.A.51.1.6 |
Gene ID: HRGMv2_0474_4_151
Type: TC
Location: 175093 - 176469 (-)
Type: TC
Location: 175093 - 176469 (-)
Gene ID: HRGMv2_0474_4_152
Type: CAZyme
Location: 177092 - 179116 (-)
Type: CAZyme
Location: 177092 - 179116 (-)
Gene ID: HRGMv2_0474_4_153
Type:
Location: 179334 - 179669 (-)
Type:
Location: 179334 - 179669 (-)
Gene ID: HRGMv2_0474_4_154
Type: pfam
Location: 179829 - 181502 (+)
Type: pfam
Location: 179829 - 181502 (+)
Gene ID: HRGMv2_0474_4_155
Type: TC
Location: 181724 - 184690 (+)
Type: TC
Location: 181724 - 184690 (+)
Gene ID: HRGMv2_0474_4_156
Type: pfam
Location: 184712 - 186508 (+)
Type: pfam
Location: 184712 - 186508 (+)
Gene ID: HRGMv2_0474_4_157
Type: pfam
Location: 186521 - 187966 (+)
Type: pfam
Location: 186521 - 187966 (+)
Gene ID: HRGMv2_0474_4_158
Type: CAZyme
Location: 187963 - 189306 (+)
Type: CAZyme
Location: 187963 - 189306 (+)
Gene ID: HRGMv2_0474_4_159
Type: CAZyme
Location: 189341 - 191440 (+)
Type: CAZyme
Location: 189341 - 191440 (+)
Gene ID: HRGMv2_0474_4_160
Type:
Location: 191593 - 191706 (-)
Type:
Location: 191593 - 191706 (-)
Gene ID: HRGMv2_0474_4_161
Type: TC
Location: 191757 - 192518 (+)
Type: TC
Location: 191757 - 192518 (+)
Gene ID: HRGMv2_0474_4_162
Type: TC
Location: 192552 - 193166 (+)
Type: TC
Location: 192552 - 193166 (+)
Gene ID: HRGMv2_0474_4_163
Type: TC
Location: 193163 - 193735 (+)
Type: TC
Location: 193163 - 193735 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Amulumruptor
Species
Amulumruptor caecigallinarius
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.